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This article mainly shows you "what is the use of lnc2Cancer database", the content is easy to understand, clear, hope to help you solve your doubts, the following let the editor lead you to study and learn "what is the use of lnc2Cancer database" this article.

Lnc2Cancer is a database of human lncRNA-related tumor information collected from the literature.

Http://www.bio-bigdata.net/lnc2cancer/

The latest version is v2.0. Compared with v1.0, there is a significant increase in the number of lncRNA, tumor subtypes and the number of lncRNA associated with tumors, as shown below.

In this database, the relationship between lncRNA and tumors is divided into the following categories

Circulating lncRNA-cancer

Prognositc lncRNA-cancer

Drug resistant lncRNA-cancer

According to the different stages of disease and treatment, it is divided into three aspects: tumorigenesis, prognosis and drug resistance. at the same time, other molecular information on the regulation of lncRNA reported in the literature is also given, including the following

TF

MiRNA

Variant

Methylation

Through the Browser function, you can view the relevant results based on lncRNA or cancer. Take the lncRNA of HOTAIR as an example, the results are as follows

Not only gives the names of related diseases, literature, but also gives the verification methods, expression trends and other information, click details, you can further view the specific details.

The NGS data used in the literature can be viewed through HIGH-THROUGHPUT, as shown below

Through the corresponding GEO number, you can download the original data, which makes it convenient for us to analyze based on the existing data of others.

The data in the database is downloaded free of charge, as shown below

Compared with the lncrnadisease database, ln2Cacner focuses on the field of oncology, and makes a detailed division, but also provides related information such as TF, miRNA, SNP, methylation and so on.

The above is all the contents of the article "what is the use of lnc2Cancer database". Thank you for reading! I believe we all have a certain understanding, hope to share the content to help you, if you want to learn more knowledge, welcome to follow the industry information channel!

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