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2025-01-19 Update From: SLTechnology News&Howtos shulou NAV: SLTechnology News&Howtos > Servers >
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How to calculate SNP density according to vcf file and use circlize to visualize the results, many novices are not very clear about this, in order to help you solve this problem, the following editor will explain in detail for you, people with this need can come to learn, hope you can get something.
Command vcftools-- vcf snp.bialles.vcf-- SNPdensity 100000-- out StatResults/SNPdensity
100000 is the specified window length
-- out is the prefix of the output file
Drawing using circlize package in R language
Code
Df
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