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This article will explain in detail how python reads the contents of the kgml file in the kegg drawing configuration file. The editor thinks it is very practical, so I share it with you for reference. I hope you can get something after reading this article.

Kgml

Kegg has a kgml file that we need to read. Share the python code as follows:

#-*-coding: utf-8-*-'import sys, os, argparse, glob, os.path,timereload (sys) sys.setdefaultencoding (' utf8') from pyh import * import numpy as npimport mathimport reimport xml.dom.minidom from xml.dom.minidom import parseString GetDOMImplementationfrom collections import OrderedDictimport urllibimport shutilimport codecsimport uuidfrom PIL import ImageBin=os.path.split (os.path.realpath (_ file__)) [0] # dom = xml.dom.minidom.parse (sys. Argv [1]) root = dom.documentElementff=open (sys.argv [2]) "w") if root.nodeName=='pathway': for i in root.childNodes: if i.nodeType==1: if i.nodeNameplate inside entryboards: link=i.getAttribute ('link') # print link+'\ n' for g in i.childNodes: if g.nodeNameplate written graphs: type=g.getAttribute ('type) ') x=g.getAttribute (' x') y=g.getAttribute ('y') width=g.getAttribute ('width') height=g.getAttribute (' height') # print "% s\ t% s\ n"% (type) ) ff.write ("% s\ t (% s)\ t% s\ n"% (type,x+','+y+ "," + width+ "," + height,link)) about how python reads the contents of kgml files in the kgml drawing configuration file "ends here. Hope that the above content can be helpful to you, so that you can learn more knowledge, if you think the article is good, please share it for more people to see.

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